Hyperlink management system
[ Japanese ]

About "Hyperlink management system CGI"

This service is a program that extracts the relation with ID of the data base besides ID of a certain data base, and forwards it to URL of a pertinent data base automatically.*
The link management between data bases by ID becomes unnecessary because it builds this program into HTML.
*When two or more forwarding destination URL exists, the list display is done.

How to use the CGI-program

In order to create hyperlinks using the CGI-program of the Hyperlink Management System, use the following URL as a target URL..
		http://biodb.jp/hfs.cgi?id=[ID]&type=[ID Type]&db=[Database Name]
	
The parameters given to the CGI-program are as follows.

  1. [ID]
    Source ID (original ID).

  2. [ID Type]
    The type of source ID. Choose from below.
    ID list

  3. [Database name]
    The name of target database. Choose from below.
    Database list

Sample

The hyperlink to the "Transcript view" of H-InvDB using the INSD accession number "BC053657" will be the following URL.
	http://biodb.jp/hfs.cgi?id=BC053657&type=ACC_ID&db=TRANSCRIPTVIEW
	

In HTML, you can write as follows.
	<a href='http://biodb.jp/hfs.cgi?id=BC053657&type=ACC_ID&db=TRANSCRIPTVIEW'>BC053657</a>
	Sample:BC053657
	

    ID list
    No.FormatOutline
    1ACC_IDAccession Number
    2HIT_IDH-Inv transcript ID(HIT)
    3HIX_IDH-Inv cluster ID (HIX)
    4HIP_IDH-Inv protein ID (HIP)
    5UNIPROT_IDUniProt Accession Number
    6GENE_SYMBOLHUGO gene symbol
    7REF_SEQRefSeq
    8OMIM_IDOMIM ID
    9GENE_IDGeneID
    10PUBMED_IDPubMed ID
    11JSNP_IDdbSNP rs#
    12MS_IDMarker Name
    13PDB_IDPDBj ID
    14FR_IDfRNAdb ID
    15ENST_IDEnsembl Transcript ID
    16ENSG_IDEnsembl Gene ID
    17CLONE_IDClone ID (by NBRC)
    18FLJ_IDFLJ ID (by NBRC)
    19HPRD_IDHPRD ID


    Database list
    No.FormatOutline
    1TRANSCRIPTVIEWH-InvDB (Transcript view)
    2LOCUSVIEWH-InvDB (Locus view)
    3GINTEGRAH-InvDB (G-integra)
    4PPIH-InvDB (PPI view)
    5NUCLEOTIDENCBI (Nucleotide)
    6GENBANKNCBI (GenBank)
    7ENTREZGENENCBI (Entrez Gene)
    8OMIMNCBI (OMIM)
    9PUBMEDNCBI (PubMed)
    10GEMDBJGeMDBJ
    11HUGOHUGO
    12MUTATIONVIEWMutationView
    13HGOLDH-GOLD
    14PDBPDB
    15UNIPROTUniProt
    16ENSTEnsembl Transcriptview
    17ENSGEnsembl Geneview
    18GGDBGGDB
    19FRNADBfRNAdb
    20NBRCNBRC
    21HGPDHGPD
    22KEGGKEGG Gene
    23PATHWAYKEGG Pathway
    24HPRDHPRD