Hyperlink management system
[ Japanese ]

About "Hyperlink management system CGI"

This service is a program that extracts the relation with ID of the data base besides ID of a certain data base, and forwards it to URL of a pertinent data base automatically.*
The link management between data bases by ID becomes unnecessary because it builds this program into HTML.
*When two or more forwarding destination URL exists, the list display is done.

How to use the CGI-program

In order to create hyperlinks using the CGI-program of the Hyperlink Management System, use the following URL as a target URL..
		http://biodb.jp/hfs.cgi?id=[ID]&type=[ID Type]&db=[Database Name]
	
The parameters given to the CGI-program are as follows.

  1. [ID]
    Source ID (original ID).

  2. [ID Type]
    The type of source ID. Choose from below.
    ID list

  3. [Database name]
    The name of target database. Choose from below.
    Database list

Sample

The hyperlink to the "Transcript view" of H-InvDB using the INSD accession number "BC053657" will be the following URL.
	http://biodb.jp/hfs.cgi?id=BC053657&type=ACC_ID&db=TRANSCRIPTVIEW
	

In HTML, you can write as follows.
	<a href='http://biodb.jp/hfs.cgi?id=BC053657&type=ACC_ID&db=TRANSCRIPTVIEW'>BC053657</a>
	Sample:BC053657
	

    ID list
    No.FormatOutline
    1HIX_IDH-Inv cluster ID (HIX)
    2HIT_IDH-Inv transcript ID (HIT)
    3HIP_IDH-Inv protein ID (HIP)
    4GENE_IDGeneID
    5ACC_IDAccession Number
    6PROTEIN_IDRefSeq Protein ID
    7OMIM_IDOMIM ID
    8REF_SEQRefSeq ID
    9PUBMED_IDPubMed ID
    10UNIPROT_IDUniProt Accession Number
    11GENE_SYMBOLHUGO gene symbol
    12JSNP_IDdbSNP rs#
    13MS_IDMarker Name
    14PDB_IDPDB ID
    15FR_IDfRNAdb ID
    16ENSG_IDEnsembl Gene ID
    17ENST_IDEnsembl Transcript ID
    18ENSP_IDEnsembl Protein ID
    19CLONE_IDClone ID (by NBRC)
    20FLJ_IDFLJ ID (by NBRC)
    21HPRD_IDHPRD ID
    22CIPRO_IDCIPRO ID
    23KEGG_IDKEGG Gene ID
    24PATHWAY_IDKEGG Pathway ID
    25DGV_IDDGV ID
    26PEPTIDE_IDPeptide Accession
    27CCO_PDBECHEM_IDPdbeChem ID
    28CCO_DRUGBANK_IDDrugBank ID


    Database list
    No.FormatOutline
    1TRANSCRIPTVIEWH-InvDB (Transcript view)
    2LOCUSVIEWH-InvDB (Locus view)
    3GINTEGRAH-InvDB (G-integra)
    4PPIH-InvDB (PPI view)
    5NUCLEOTIDENCBI RefSeq nucleotide
    6GENBANKNCBI GenBank
    7ENTREZGENENCBI Entrez Gene
    8OMIMNCBI OMIM
    9PUBMEDNCBI PubMed
    10GEMDBJGeMDBJ
    11HUGOHUGO
    12MUTATIONVIEWMutationView
    13HGOLDH-GOLD
    14PDBPDB
    15UNIPROTUniProt
    16ENSTEnsembl Transcriptview
    17ENSGEnsembl Geneview
    18GGDBGGDB
    19FRNADBfRNAdb
    20NBRCNBRC
    21HGPDHGPD
    22KEGGKEGG Gene
    23PATHWAYKEGG Pathway
    24HPRDHPRD
    25LEGENDALEGENDA
    26EVOLAEVOLA
    27HDBASH-DBAS
    28GCOMPASSG-Compass
    29PROTEINVIEWProtein View
    30CIPROCIPRO
    31HANGELH-ANGEL
    32FLJHFLJ Human cDNA
    33VARYSYSDBVarySysDB
    34PDBECHEMPDBeChem
    35DRUGBANK_HDrugBank
    36WIKIPEDIA_HPWikipedia Human proteins
    37JSNPJSNP
    38PROTEINNCBI RefSeq protein
    39DGVDGV
    40COXPRESCOXPRESdb
    41ATLASHuman Protein ATLAS
    42PEPTIDEPeptide Atlas
    43ENSPEnsembl Protein
    44NEXTPROTneXt Prot